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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.E00490.2 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
C2H2 |
| Protein Properties |
Length: 296aa MW: 31583.5 Da PI: 4.5923 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.E00490.2 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 16.3 | 2.7e-05 | 270 | 293 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
+ C+ C+k+F + s L++H + H
Pahal.E00490.2 270 HACKTCSKTFGSESALESHKKAkH 293
67*****************99877 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MEFWGEEVKP GTKVSCKADE GYVIHLSQAA LGETKKGSEN VVVSVKVDDK KLVLGTLSAE 60
KHPQIMCDLI FNSYFELSHS SKTTSVFLCG YKSQIPVFED DSGDDEISSD EELETDEIPI 120
KKDEITAVPV KDGKNAKQDV DEEMSSGDDG FSDGSDGSEM SEDESSDEET SSGADLSGDS 180
EDESDESEEE QTPTPKKPDL GGKKRAIEAV TPSGKKAKVE PSGQKTGDKK GHVSTPHPTK 240
QASKTPADKS GKTPATDKKS KEKSPKSGSH ACKTCSKTFG SESALESHKK AKHEA*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (By similarity). {ECO:0000250}. |
