PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pahal.G00454.1
Organism
Panicum hallii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
Family EIL
Protein Properties Length: 470aa    MW: 51392.2 Da    PI: 5.5312
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pahal.G00454.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3340.92.9e-104703632292
                     XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX..............XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
            EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn..............ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgk 82 
                     +lkkrmwkdq ll++l++ + +     +++ g++++                ++ ++rrk+m raQDg++++Mlk+me+cna+GfvYg + e g 
  Pahal.G00454.1  70 DLKKRMWKDQLLLMKLEGLSGRDGRGSHPDHGQQQQPvpdqllaaskdreeSPETRYRRKAMLRAQDGVIRHMLKMMEACNARGFVYGVVGEDGV 164
                     8****************99999998888876666555777888888877879999**************************************** PP

                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S- CS
            EIN3  83 pvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGk 177
                     pv+g+sdsLr+WWk++v fdr gp a+   q   +  +g+ ++ + + s    l+++qD+tlgSLLsal+qhc+ppqr+fpl++g++pPWWPtG+
  Pahal.G00454.1 165 PVSGSSDSLRGWWKDDVGFDRSGPLALLAGQE--A--TGGPGSPM-AASFLYGLHDIQDSTLGSLLSALIQHCEPPQRSFPLDRGLAPPWWPTGR 254
                     ***************************98854..3..34444433.899********************************************** PP

                     -HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXXXXXXXX CS
            EIN3 178 elwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahssslrkqs 271
                     e wwg +g ++++qg+ppy+kphdlkkawk+s+L+avikh+ p+++++r+l++qsk+lq+kmsa++  ++++v+ qee++ ++ +         +
  Pahal.G00454.1 255 EPWWGMQGeAQAHQGPPPYRKPHDLKKAWKISLLSAVIKHLTPRFDQMRKLVWQSKRLQHKMSARDAETWSKVITQEEALDRHAQR--------A 341
                     ********9999******************************************************************97753222........2 PP

                     XXXXXXXXXXXXXX.XXXXXX. CS
            EIN3 272 pkvtlsceqkedve.gkkeski 292
                      ++t  +e++ed + g + + +
  Pahal.G00454.1 342 LQITPLEEEDEDDDaGADSPLV 363
                     2333333333333324444443 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.2E-11170332No hitNo description
Gene3DG3DSA:1.10.3180.104.6E-62208339IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167684.45E-55211334IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MENGESIEYY QKPAAHAASK PTTMDGDEAC AKENGKGKAG HRAAEPEPEV SQEEFFSDSE  60
SGSESIEIAD LKKRMWKDQL LLMKLEGLSG RDGRGSHPDH GQQQQPVPDQ LLAASKDREE  120
SPETRYRRKA MLRAQDGVIR HMLKMMEACN ARGFVYGVVG EDGVPVSGSS DSLRGWWKDD  180
VGFDRSGPLA LLAGQEATGG PGSPMAASFL YGLHDIQDST LGSLLSALIQ HCEPPQRSFP  240
LDRGLAPPWW PTGREPWWGM QGEAQAHQGP PPYRKPHDLK KAWKISLLSA VIKHLTPRFD  300
QMRKLVWQSK RLQHKMSARD AETWSKVITQ EEALDRHAQR ALQITPLEEE DEDDDAGADS  360
PLVAAHHVDK RKRKGPDDDG EHQEAKGAVA DDGGQHSGGA VAEAATPVPV AHHDVLLHGL  420
LQHGGGAAHQ TGASVHEDDV LLRSLQGVAD VVDMSDFPNS PIWQWGVYD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-472113364128Protein ETHYLENE INSENSITIVE 3
4zds_B5e-472113364128Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0430830.0BT043083.1 Zea mays full-length cDNA clone ZM_BFc0091K23 mRNA, complete cds.
GenBankJX4699690.0JX469969.1 Zea mays subsp. mays clone UT3232 EIL-type transcription factor mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025823376.10.0ETHYLENE INSENSITIVE 3-like 5 protein isoform X2
SwissprotQ9FJQ52e-88EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
TrEMBLA0A2S3I7A10.0A0A2S3I7A1_9POAL; Uncharacterized protein
STRINGPavir.Gb01550.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.13e-89EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]