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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pavir.5NG025400.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
G2-like |
| Protein Properties |
Length: 296aa MW: 31809.9 Da PI: 4.7603 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.5NG025400.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 23.5 | 1.2e-07 | 267 | 285 | 1 | 19 |
G2-like 1 kprlrWtpeLHerFveave 19
k rlrWt eLHerFveav+
Pavir.5NG025400.1.p 267 KSRLRWTLELHERFVEAVS 285
68***************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MSSQSVATGE QIIAPNQIVH ACTSTQTSVH KLFDAKLDHG FLIDDTLSST SQSSNIKTEL 60
IRTSSLSRSL SVNLQKRSPE SDPESPLSHV SHPKFSDPIL SNSSTFCTSL FSSSSKNTDP 120
CRQMGTLPFL PHPPKCEQQV SAGQSSSSSL LLSGDTGNAL DEAGQSDDLK DFLNLSGDAS 180
DGSFHGENNI LAFDEQMEFQ FLSEQLGIAI TDNEESPHLD DIYGTPPQLS SLPVSSCSNQ 240
SKQNLGSPVK VQLSSSRSSS DSATTNKSRL RWTLELHERF VEAVSDNSHI KNCVS*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | DEVELOPMENTAL STAGE: Expressed throughout all stages of plant growth. Increased expression in leaves before the booting stage. {ECO:0000269|PubMed:26082401}. |
| Uniprot | TISSUE SPECIFICITY: Expressed in the root cap and in the exodermis of the root, in the root tip of lateral roots, in the mesophyll cells of the leaf, in pollen, vascular cylinder of the anther and the veins of the lemma, palea and pistils, and in the xylem and phloem regions of large vascular bundles, small vascular bundles and diffuse vascular bundles in node I (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269|PubMed:26082401}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF184668 | 1e-174 | KF184668.1 Saccharum hybrid cultivar R570 clone BAC 005I10 complete sequence. |
| GenBank | KF184707 | 1e-174 | KF184707.1 Saccharum hybrid cultivar R570 clone BAC 084G07 complete sequence. |
| GenBank | KF184833 | 1e-174 | KF184833.1 Saccharum hybrid cultivar R570 clone BAC 001I10 complete sequence. |
