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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pbr000044.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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| Family |
GRAS |
| Protein Properties |
Length: 537aa MW: 60188.2 Da PI: 6.2332 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr000044.1 | genome | CPETR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 419.1 | 3.9e-128 | 166 | 536 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98
l+++L++cA+a+s++++ +a +l++ l +++s +g+pmqRl ay++e+L+arl +s+s++yk+l+++ + sse ++++++++ ++P+ +f++l a
Pbr000044.1 166 LKNVLIDCARAISENEFDNAISLMEVLGQMVSVSGEPMQRLGAYMLEGLRARLEGSGSSIYKTLKCEVPT---SSELMSYMSVLYRICPYWRFAYLSA 260
5789*****************************************************************9...9999********************* PP
GRAS 99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
N I ea+e+e r+HiiDf+i qG QW++L+q La++p+gpp++RiTgv++ +s+ + l+ + +rL+++A++++vpfefn+ +a +++el++L
Pbr000044.1 261 NVVIREALENEPRIHIIDFQIAQGSQWIPLIQDLACQPGGPPRIRITGVDDTQSEhaRGGGLHIVSKRLSELAASCNVPFEFNA-AAMCGSEVELHNL 357
***************************************************9988889999***********************.899********** PP
GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
r++pgEa+aVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n++ F rf+e ++yy+a+f+s+++ pr+++eri+ E ++++r
Pbr000044.1 358 RIQPGEAIAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTLVEQESNTNTSLFYSRFVEMVDYYTAMFESIDVARPRDDKERISAEMHCVAR 455
************************************************************************************************** PP
GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
+ivn+vacegaer+erhe ++kWr+rl++ GF+p+pls k+++ ++ ll++++++ +r++e +g+l+l+W++r++ + SaWr
Pbr000044.1 456 DIVNMVACEGAERVERHELFGKWRSRLMMDGFTPYPLSPKVTEAIRVLLKEYHGN-FRIQEANGALYLTWMQRAMATSSAWR 536
*****************************************************77.*************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 537 aa
Download sequence Send
to blast |
MKASQQHRGV ALYHQPVQQI DRCGFQILEK SMYPDTGSQG NNLSFQNYKD DKEQFFTLDS 60
SPATAFLTCD SPSAISGLSN RSPFSPQGSH SCFSDQHHSS GNNYGSPISG CSIIVDDDFK 120
SKLREMEVSL LGPDSDIVDS HFCSHRSGMA RWSHSQIAET IPKLNLKNVL IDCARAISEN 180
EFDNAISLME VLGQMVSVSG EPMQRLGAYM LEGLRARLEG SGSSIYKTLK CEVPTSSELM 240
SYMSVLYRIC PYWRFAYLSA NVVIREALEN EPRIHIIDFQ IAQGSQWIPL IQDLACQPGG 300
PPRIRITGVD DTQSEHARGG GLHIVSKRLS ELAASCNVPF EFNAAAMCGS EVELHNLRIQ 360
PGEAIAVNFP YVLHHMPDES VSTENHRDRL LRLVKSLSPK VVTLVEQESN TNTSLFYSRF 420
VEMVDYYTAM FESIDVARPR DDKERISAEM HCVARDIVNM VACEGAERVE RHELFGKWRS 480
RLMMDGFTPY PLSPKVTEAI RVLLKEYHGN FRIQEANGAL YLTWMQRAMA TSSAWR*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
