PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr000355.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

HSF

Protein Properties

Length: 134aa MW: 15377.5 Da PI: 8.8262

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr000355.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	23.8	1.2e-07	20	55	72	102
TTT.....XTTSEEEEESXXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 72 sks.....kekiweFkhksFkkgkkellekikrkks 102 +k+ ++k+weFkh++F+kg +++l +i rkk Pbr000355.1 20 QKQgfkktSPKLWEFKHEKFQKGCRHMLVEITRKKC 55 1223333359***********************986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.10.10.10	1.5E-5	19	53	IPR011991	Winged helix-turn-helix DNA-binding domain

Sequence ? help Back to Top
Protein Sequence Length: 134 aa Download sequence Send to blast
MNYISQKFGN STCDSNPQNQ KQGFKKTSPK LWEFKHEKFQ KGCRHMLVEI TRKKCEPSAF 60 PAYLKASEES GSTSTALAAA EENNCLLLME ENKNLRKQQL ELQVQIAQFR TLENKLLDCV 120 AQYMDDHRNK ARC*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr000355.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009338727.1	2e-77	PREDICTED: heat stress transcription factor B-2a-like
TrEMBL	A0A314ZQ47	5e-64	A0A314ZQ47_PRUYE; Heat stress transcription factor B-2a
STRING	XP_009338727.1	8e-77	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF11357	28	39