PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr000539.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family BES1
Protein Properties Length: 332aa    MW: 35277.3 Da    PI: 8.5497
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr000539.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822225.31.2e-6931541150
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  ++++r+ptwkErEnnk+RERrRRaiaakiy+GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp ++++++g s+sasp+ss+q s+
  Pbr000539.1   3 TSGTRMPTWKERENNKKRERRRRAIAAKIYSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEEDGTTYRKGCKPVDRMDIMGGSTSASPCSSYQPSP 100
                  5899********************************************************************************************** PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
                   +s+ +sp +sy++sp+sssfpsp+++  + + +a  +sl+p+l++ls+ sss+
  Pbr000539.1 101 CASYNPSPGASYNPSPASSSFPSPARYPANGNGNAdaNSLIPWLKTLSSGSSSA 154
                  **************************99987766566**********9977765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056876.8E-684148IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MMTSGTRMPT WKERENNKKR ERRRRAIAAK IYSGLRMYGN YKLPKHCDNN EVLKALCNEA  60
GWTVEEDGTT YRKGCKPVDR MDIMGGSTSA SPCSSYQPSP CASYNPSPGA SYNPSPASSS  120
FPSPARYPAN GNGNADANSL IPWLKTLSSG SSSATSKLPQ LFVQGGSISA PVTPPLSSPT  180
CRTPRTKSDW DEAVAGSNWA GQHYPFLPSS TPPSPGRQVL PDSGWLAGLQ IPQSGPSSPT  240
FSLVSRNPFN LKEALSGGGS RMWTPGQSGT CSPAVAASID HTGDVPMSDG MAAEFAFGSN  300
TTGLVKPWEG ERIEECVSDD LELTLGSTRT R*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-24778372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr000539.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008371512.10.0BES1/BZR1 homolog protein 4-like
RefseqXP_009351745.10.0PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-127BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498JVF10.0A0A498JVF1_MALDO; Uncharacterized protein
STRINGXP_009351745.10.0(Pyrus x bretschneideri)
STRINGXP_008371512.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26613375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-112BES1/BZR1 homolog 4