PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr000673.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 127aa    MW: 14236.9 Da    PI: 8.9651
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr000673.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.81.1e-074895255
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 ++kGV    ++g W A+I+       ++r++lg f +++e a a++  + kl++
  Pbr000673.1 48 KFKGVV-PQQNGHWGAQIYAD-----NQRIWLGAFKSEKESAMAYDSVAIKLRN 95
                 789996.666899****9994.....5**********99************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.27E-1847106No hitNo description
SMARTSM003803.5E-1148110IPR001471AP2/ERF domain
PROSITE profilePS5103215.3348104IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-1248105IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.3E-1348104IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MGEDASIIMI SSAQRNLALE TSDSNETAFA LLHPNKRARH DNGVSFAKFK GVVPQQNGHW  60
GAQIYADNQR IWLGAFKSEK ESAMAYDSVA IKLRNGKDLH RNFPWTSFTV QEPHFQNHYS  120
TDAIMK*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr000673.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376608.15e-89PREDICTED: LOW QUALITY PROTEIN: AP2/ERF and B3 domain-containing transcription factor At1g51120-like
SwissprotQ9C6884e-31RAVL3_ARATH; AP2/ERF and B3 domain-containing transcription factor At1g51120
TrEMBLA0A314YVY75e-71A0A314YVY7_PRUYE; AP2/ERF and B3 domain-containing transcription factor
STRINGXP_009376608.12e-88(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51120.12e-33RAV family protein