PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr001076.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 234aa    MW: 26492.9 Da    PI: 11.0606
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr001076.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.97.7e-12131175549
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                  ++ rr+++NRe+ArrsR RK++ +e+L++ v  L  eN++L ++l
  Pbr001076.1 131 RKRRRMISNRESARRSRMRKQKHLENLRNQVNRLRVENRELNNRL 175
                  5789**********************************9998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-13127191IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.3E-10127175No hitNo description
PROSITE profilePS5021710.818129175IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.49E-10131178No hitNo description
PfamPF001701.9E-9131175IPR004827Basic-leucine zipper domain
CDDcd147023.69E-19132179No hitNo description
PROSITE patternPS000360134149IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    Send to blast
MKHQRFVPSL SSSPLPSLSK LEVQRAFVVA TMLSTLPANL PSDSLLHLSA FDGGFTPGGF  60
TPWDCSDLFQ ATPSPEPVIS TLSSSPVQSP KTVISSSGSD DDPNRPDRSH ANAKSCQNDD  120
SNRTVSVVDE RKRRRMISNR ESARRSRMRK QKHLENLRNQ VNRLRVENRE LNNRLRIVLY  180
HSQCVRTDND RLRSDHVLLR RKLSDIRRIL VFSQLQHFSS AWPCNTIIPE QTP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1130134RKRRR
2130151RKRRRMISNRESARRSRMRKQK
3143150RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr001076.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009362602.11e-145PREDICTED: bZIP transcription factor 11
TrEMBLM5WJW11e-103M5WJW1_PRUPE; Uncharacterized protein
STRINGXP_009362602.11e-145(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54353254
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22850.28e-22basic leucine-zipper 6