PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr004208.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 180aa    MW: 19094.1 Da    PI: 5.234
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr004208.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.54.5e-151967254
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                 + kGVr++k +g+Wv+eIr+p +   r r +lg+f tae Aa a++    +l+
  Pbr004208.1 19 KLKGVRQRK-WGKWVSEIRVPGT---RDRLWLGTFSTAEAAAVARDVGYYCLR 67
                 679*****9.**********943...5*****************998888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008479.3E-81956IPR001471AP2/ERF domain
CDDcd000182.71E-231978No hitNo description
SMARTSM003803.1E-221984IPR001471AP2/ERF domain
PROSITE profilePS5103219.731978IPR001471AP2/ERF domain
SuperFamilySSF541716.02E-161979IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.106.6E-232078IPR001471AP2/ERF domain
PRINTSPR003671.3E-82031IPR001471AP2/ERF domain
PRINTSPR003671.3E-84258IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MSYSSEESGS TPCSTSNRKL KGVRQRKWGK WVSEIRVPGT RDRLWLGTFS TAEAAAVARD  60
VGYYCLRRPS TLEGLNFPLM LPSCVSDDMS PRSVQKAASD AGMAVDAQLI ANKSPPPQPA  120
GTGSNALETT EFWENGYVGE TSTSTPTSTS MSSWGGGHGF GNGGDHQGCL SISVEDYDL*
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr004208.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009335462.11e-130PREDICTED: ethylene-responsive transcription factor ERF019-like
RefseqXP_009378898.11e-130PREDICTED: ethylene-responsive transcription factor ERF019-like
SwissprotO805421e-44ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLA0A498J9X21e-104A0A498J9X2_MALDO; Uncharacterized protein
STRINGXP_009335462.11e-130(Pyrus x bretschneideri)
STRINGXP_009378898.11e-130(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF54893054
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.13e-46ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]