PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr005006.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family BES1
Protein Properties Length: 317aa    MW: 33967.9 Da    PI: 8.8118
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr005006.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822219.95.5e-6851481148
       DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqssl 98 
                  g+sgr ptwkErEnnkrRERrRRaiaakiy+GLRaqG yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp   +e+ag+ +++s +ss+ +s+
  Pbr005006.1   5 GSSGRLPTWKERENNKRRERRRRAIAAKIYSGLRAQGSYKLPKHCDNNEVLKALCAEAGWVVEEDGTTYRKGCKPS-PMEIAGTPTNISACSSILQSP 101
                  689************************************************************************9.********************* PP

       DUF822  99 kssalaspvesysaspksssfpspssldsislasaasllpvlsvlslvss 148
                  +ssa++spv+sy+asp+sssfpsp+++d ++++    llp+l++ ++++ 
  Pbr005006.1 102 QSSAFPSPVPSYHASPSSSSFPSPARFDGNPSS---YLLPFLRNIASIPT 148
                  ******************************985...89999999887665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.8E-636130IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009741Biological Processresponse to brassinosteroid
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MTGGGSSGRL PTWKERENNK RRERRRRAIA AKIYSGLRAQ GSYKLPKHCD NNEVLKALCA  60
EAGWVVEEDG TTYRKGCKPS PMEIAGTPTN ISACSSILQS PQSSAFPSPV PSYHASPSSS  120
SFPSPARFDG NPSSYLLPFL RNIASIPTNL PPLRISNSAP VTPPLSSPTS RGSKRKPDWD  180
SLTNGCINSL HHPLFAASAP SSPTRRHHLT PATIPECDES DASTVDSGRW VSFQTGAPSV  240
APPSPTFNLM KPVAEQNVLK NAVEAHVGMG WGSTAERGRG SEFEFESGTV KAWEGERIHE  300
VGADDLELTL GNGKNH*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-30987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-30987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-30987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-30987372450Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr005006.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009349751.10.0PREDICTED: BES1/BZR1 homolog protein 2-like
SwissprotQ94A431e-118BEH2_ARATH; BES1/BZR1 homolog protein 2
TrEMBLA0A498HZZ30.0A0A498HZZ3_MALDO; Uncharacterized protein
STRINGXP_009349751.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF127534105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75080.21e-100BES1 family protein