PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr006046.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 223aa    MW: 24189.4 Da    PI: 9.8339
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr006046.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_171.99.7e-2378140163
                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                  ++e+krerrkq+NRe+ArrsR+RK+ae+eeL++ v++L+a+N aLk+e+++l++++a+lk e+
  Pbr006046.1  78 DREIKRERRKQSNRESARRSRLRKQAETEELAQQVDALSAKNVALKSEINRLTENSATLKLEK 140
                  689********************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-1872137No hitNo description
SMARTSM003381.8E-1978142IPR004827Basic-leucine zipper domain
PfamPF001701.1E-2079140IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.5380143IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-1181137No hitNo description
CDDcd147025.99E-1983131No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MRPGPVSAKE ANAATDKVLG VTIAAANIPG KVVGPAVFPG VTTVLELNNP PILNSKTSPT  60
CVPQSCAVLP PETWIDNDRE IKRERRKQSN RESARRSRLR KQAETEELAQ QVDALSAKNV  120
ALKSEINRLT ENSATLKLEK TTLLDKLKNA RAGRMEDIIM NIDDKRVQPF STENLLSRVN  180
NAGSVARDAE KDGDNDMYEK NKGAKLHQLL DTSPRADAVA AG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194100RRSRLRK
294101RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr006046.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By light.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009350192.11e-160PREDICTED: common plant regulatory factor 1-like, partial
SwissprotQ990896e-65CPRF1_PETCR; Common plant regulatory factor 1
TrEMBLA0A498JFV91e-147A0A498JFV9_MALDO; Uncharacterized protein
STRINGXP_009350192.11e-159(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2773323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.14e-43G-box binding factor 3
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]
  2. Feldbrügge M,Hahlbrock K,Weisshaar B
    The transcriptional regulator CPRF1: expression analysis and gene structure.
    Mol. Gen. Genet., 1996. 251(6): p. 619-27
    [PMID:8757392]