PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr009056.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 209aa    MW: 23054.3 Da    PI: 10.2186
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr009056.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.22.6e-10971223055
          AP2  30 rfslgkfgtaeeAakaaiaarkkleg 55 
                  r +lg+f+taeeAa+a+++a+++l+g
  Pbr009056.1  97 RKWLGTFDTAEEAARAYDEAALSLRG 122
                  68**********************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103215.44847130IPR001471AP2/ERF domain
SMARTSM003802.3E-1147136IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-1194130IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.9E-1794130IPR001471AP2/ERF domain
PfamPF008474.5E-697122IPR001471AP2/ERF domain
CDDcd000181.04E-1597129No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    Send to blast
MSTVDALHLR DTALSLAVEP PSPPPGIPRP QTKHAAPVQA GAGKDPHFRG VRKXXXXXXX  60
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXKPRKWL GTFDTAEEAA RAYDEAALSL  120
RGPKAKTNFG NLALVPPHSL LLGGGSEMFW PPPPMYFMSG APAVAPIRSE YRGYKLENVD  180
AVGGQEEKKM RKDKKPFLFD LNLPAPLF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr009056.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009367783.17e-97PREDICTED: ethylene-responsive transcription factor 8-like
TrEMBLA0A498IYX02e-88A0A498IYX0_MALDO; Uncharacterized protein
STRINGXP_009367783.13e-96(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33034189