PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr010932.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 374aa    MW: 41605 Da    PI: 7.7921
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr010932.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.21.3e-3176129255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                   rlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  Pbr010932.1  76 SRLRWTPDLHLCFVRAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 129
                  69***************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.56572132IPR017930Myb domain
Gene3DG3DSA:1.10.10.608.1E-3072130IPR009057Homeodomain-like
SuperFamilySSF466895.55E-1573131IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-2376131IPR006447Myb domain, plants
PfamPF002493.3E-977128IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MKSESTSIEE VSKSSPSTSK KEYDHEDDEG EEDEVDEDGL QLKNNGDSSS NSTIEENHEK  60
KGASGSVRHY VRSKTSRLRW TPDLHLCFVR AVERLGGQER ATPKLVLQLM NVKGLSIAHV  120
KSHLQMYRSK KTEDPNQVLT DQAGFFMEGG DNQLYNLTQL SMLQSFNRWS SSGLRYGAND  180
HSSWRGHHHQ IYSPYSSSRT SALLDHNTRN IGLYGSVAER ILGSNSNNIM TTSANQLYTN  240
LPSPTHGQTT WRRNRDELCQ TMIHRSCQDH HSWTAAIRDH QGQNMLKRKG LDTDNCDLDL  300
NLSLKVPPKH DHGFGKGLQY GGDNHQKLLM GCSLSLTLSS SSSSKLGVKK LEGTGHGDGK  360
HGKNMASTLD LTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A7e-1876131257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B7e-1876131257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C7e-1876131257Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D7e-1876131257Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00301DAPTransfer from AT2G40260Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr010932.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009369202.10.0PREDICTED: uncharacterized protein LOC103958635
TrEMBLA0A498JM490.0A0A498JM49_MALDO; Uncharacterized protein
STRINGXP_009369202.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-46G2-like family protein