PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr012024.1
Common NameERF2
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 272aa    MW: 29815.5 Da    PI: 7.5587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr012024.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.21.3e-2089138255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                   y+G+r+++ +g+W+AeIrdp     +  r++lg+++taeeAa+a+++a+ +++g
  Pbr012024.1  89 VYRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTYDTAEEAARAYDEAAVRIRG 138
                  69*******.**********72....35**********************99997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003803.9E-3989152IPR001471AP2/ERF domain
PROSITE profilePS5103224.13189146IPR001471AP2/ERF domain
PfamPF008475.6E-1489138IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-2289146IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.8E-3389146IPR001471AP2/ERF domain
PRINTSPR003676.8E-1290101IPR001471AP2/ERF domain
CDDcd000182.02E-3290146No hitNo description
PRINTSPR003676.8E-12112128IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008219Biological Processcell death
GO:0009723Biological Processresponse to ethylene
GO:0009735Biological Processresponse to cytokinin
GO:0009753Biological Processresponse to jasmonic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051707Biological Processresponse to other organism
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MCGGAIISDF IAAKRGRKLT AQDLWSDLDT ISDLLGIDHS NSINKQPENH KVVQKPKPSI  60
TKVVTSDEKP KKASGSAAAA EGKRVRKNVY RGIRQRPWGK WAAEIRDPHK GVRVWLGTYD  120
TAEEAARAYD EAAVRIRGDK AKLNFAQPPP SSPLPSLAPD TPPPTKRRCI VAESTRVEPT  180
QPSFQTGSYY YDPLYHGGGG GEMYAKNEVA GGDGRYELKE QIWSLESFLG LDEAVVEQPS  240
QVVSGSGESD SLDLWMLDDL VAYRQQGQLL Y*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-2290145662ATERF1
3gcc_A9e-2290145662ATERF1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00109PBMTransfer from AT3G16770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr012024.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ6237160.0KJ623716.1 Pyrus x bretschneideri ethylene response factor 2 (ERF2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009370001.10.0PREDICTED: ethylene-responsive transcription factor RAP2-3 isoform X1
TrEMBLA0A0D3QIW30.0A0A0D3QIW3_9ROSA; Ethylene response factor 2
STRINGXP_009370001.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48923353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-43ethylene-responsive element binding protein