PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013071.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 88aa    MW: 9899.17 Da    PI: 5.5597
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013071.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM27.58.8e-09785173
          NAM  1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkr 73
                 +p Gfr +Ptd+e v ++L + +e+ + l+ +++++++  +k+eP+++ +     +++ ++  +y Fs+ ++ +++g+ 
  Pbr013071.1  7 VPLGFRLKPTDQEFVGHFLYNFLENIPlLPPHNTLSNIFGNKSEPSEIWEayggtQLADDQPALYLFSELKRLNPKGTA 85
                 589***********************9756667799**99********7435554444455588******999998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-8585IPR003441NAC domain
PROSITE profilePS5100511.692787IPR003441NAC domain
PfamPF023652.6E-4877IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MENHSLVPLG FRLKPTDQEF VGHFLYNFLE NIPLLPPHNT LSNIFGNKSE PSEIWEAYGG  60
TQLADDQPAL YLFSELKRLN PKGTARN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013071.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956332.12e-45uncharacterized protein LOC114824097
TrEMBLA0A498KEC15e-44A0A498KEC1_MALDO; Uncharacterized protein
STRINGXP_009358388.17e-44(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15308210