PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013149.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 249aa    MW: 26875.8 Da    PI: 5.1858
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013149.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.7e-2092142155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr+++ +grW+AeIrdp+    r kr++lg+f+taeeAa  +++a+  l+g
  Pbr013149.1  92 KKFRGVRRRP-WGRWAAEIRDPT----RrKRIWLGTFDTAEEAATVYDRAAILLKG 142
                  59********.**********84....34**********************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PIRSFPIRSF0381232.6E-613246IPR017392AP2/ERF transcription factor ERF/PTI6
CDDcd000185.12E-3292152No hitNo description
SMARTSM003801.8E-3693156IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.109.1E-3093150IPR001471AP2/ERF domain
SuperFamilySSF541711.9E-2293150IPR016177DNA-binding domain
PROSITE profilePS5103223.9293150IPR001471AP2/ERF domain
PfamPF008476.0E-1393140IPR001471AP2/ERF domain
PRINTSPR003671.8E-1094105IPR001471AP2/ERF domain
PRINTSPR003671.8E-10116132IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MIQEPDNPTR IPPKLVRIIL TEADATDSSS DDEGRSVRRV KRHVRQISLE HSSPSSSSPS  60
SSSSVSSGQS KRARKDSRPG SKSPETAADL LKKFRGVRRR PWGRWAAEIR DPTRRKRIWL  120
GTFDTAEEAA TVYDRAAILL KGPDAVTNFS NAVIKQETVV GDLTVPAAEQ GCGCVTPSSS  180
GALSSPTSVL GYGDQTPFDG LSYGYADASE FDFGLPLSLP DIMLSSNSFA RDEFGEFDID  240
DFLADVVC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A5e-19931491471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197116RRRPWGRWAAEIRDPTRRKR
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. Activates the defense genes of plants. {ECO:0000269|PubMed:11971137}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013149.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKM5065750.0KM506575.1 Eriobotrya japonica transcription factor ERF9 (ERF9) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009358484.20.0PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like
SwissprotO046821e-49PTI6_SOLLC; Pathogenesis-related genes transcriptional activator PTI6
TrEMBLA0A0H3Y9971e-151A0A0H3Y997_9ROSA; Transcription factor ERF9
STRINGXP_009358484.11e-180(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55853252
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53290.11e-30cytokinin response factor 3