PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013209.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 205aa    MW: 23482.1 Da    PI: 6.8025
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013209.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.96e-1585135555
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                  +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L+ +l++ ++ 
  Pbr013209.1  85 RKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHSLIGRLNNVSES 135
                  79****************************************999998876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-1581145IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.85283146IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.65E-1285134No hitNo description
Gene3DG3DSA:1.20.5.1709.8E-1385159No hitNo description
PfamPF001708.3E-1385136IPR004827Basic-leucine zipper domain
CDDcd147021.11E-1986134No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MLPGEIISGL HYFEPEIPLP NPSDYGFMHN QIPSHHFNTL FNNLSRQIPP PPGHDFTQQS  60
SSLSYNSSTS DDAEEHHHLR VIEERKQRRM ISNRESARRS RMRKQKHLDE LWSQVVRLRN  120
ENHSLIGRLN NVSESRDRVV EENARLKEEA SDLRQMLTNL QIGSPYNINA STFRELDSDV  180
PCITAHLRAE SSNQSIAASA DLLH*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
197104RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013209.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009355720.21e-149PREDICTED: basic leucine zipper 63
SwissprotQ9FMC26e-37BZP43_ARATH; Basic leucine zipper 43
TrEMBLD9ZIR81e-122D9ZIR8_MALDO; BZIP domain class transcription factor
STRINGXP_009355720.11e-148(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-39basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]