PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013314.2
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 248aa    MW: 27705.2 Da    PI: 7.4248
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013314.2genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.62.2e-08119166455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++iN+++  L+ l+P +     k +  a +L  ++ Y++sLq
  Pbr013314.2 119 SHSLAERVRREKINDRLRCLQNLVPGC----YKTMGMAVMLDVVISYVQSLQ 166
                  8*************************8....355888999999999999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.96E-16113184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.83E-11113170No hitNo description
PROSITE profilePS5088815.173115165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.5E-16115177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-5119166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.7E-8121171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MELIDDLCDL ETSLGTNHHE IMALSANDTS FTTDHHHQPQ PDQLPINFTH HIQSFSHNSD  60
DFLVAHSTAH LMTGDFRQET GKGKSLGGRK RKINNSDKDG EKLKEVIHVR AKRGQATDSH  120
SLAERVRREK INDRLRCLQN LVPGCYKTMG MAVMLDVVIS YVQSLQKQIE FLSMKLSAAS  180
AYYDFNSPGV DAADAMQQQQ MKVIKRATWD VAGDKYCISR GTRDGIKIRD SEGYGGLPHL  240
NNAAWPI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013314.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028951208.11e-142transcription factor bHLH75-like
TrEMBLA0A498HKX91e-141A0A498HKX9_MALDO; Uncharacterized protein
STRINGXP_008339657.11e-142(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148131112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25330.12e-48bHLH family protein