PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr014209.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 105aa    MW: 12247.5 Da    PI: 5.689
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr014209.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.36.6e-15983372
          NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgk 72
                 +G++FhP+deelv +yL  kv+g +++ e++i+e+d+y + e +d+ +    +  ++++++yfF+k + ++a+g+
  Pbr014209.1  9 VGYKFHPRDEELVEYYLYSKVRGAPFRDEHAIPEIDLYGSmEARDIWNnnggQNLEKDEDLYFFTKLKPASAKGT 83
                 8*************************99999******965499999633444333467799*****999988876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.79E-13386IPR003441NAC domain
PROSITE profilePS5100514.2137104IPR003441NAC domain
PfamPF023652.0E-9990IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 105 aa     Download sequence    Send to blast
MAPSNNFSVG YKFHPRDEEL VEYYLYSKVR GAPFRDEHAI PEIDLYGSME ARDIWNNNGG  60
QNLEKDEDLY FFTKLKPASA KGTGSHDRVW DMERRELRDQ SRRS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr014209.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008385925.13e-42NAC domain-containing protein 41-like
TrEMBLA0A498IKW71e-41A0A498IKW7_MALDO; Uncharacterized protein
TrEMBLA0A498KD133e-42A0A498KD13_MALDO; Uncharacterized protein
STRINGXP_009372720.17e-43(Pyrus x bretschneideri)
STRINGXP_008366403.11e-43(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.27e-10NAC domain containing protein 50