PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr015149.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 174aa    MW: 18943.1 Da    PI: 10.3196
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr015149.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY38.52.3e-12111133123
                  ---SS-EEEEEEE--TT-SS-EE CS
         WRKY   1 ldDgynWrKYGqKevkgsefprs 23 
                  ldDgy+WrKYGqK vk+++fprs
  Pbr015149.1 111 LDDGYRWRKYGQKAVKNNKFPRS 133
                  59********************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.9E-1396133IPR003657WRKY domain
SuperFamilySSF1182903.27E-10103133IPR003657WRKY domain
PROSITE profilePS5081113.242106133IPR003657WRKY domain
SMARTSM007742.8E-6111149IPR003657WRKY domain
PfamPF031063.0E-8112133IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    Send to blast
MENYPTFFSS STSPAPSSLS LNMGNPAHHA YNSTDLRQFQ SSKSSNGFLG LMSEMGASNN  60
MIKNNFSSQG KSVGGSGTSA PTVRLGMKKG DQKKIRKPRY AFQTRSQVDI LDDGYRWRKY  120
GQKAVKNNKF PRSSVIDHGV LSLLKSCNSL DGLAAASETS YHNVETEPHI GER*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr015149.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF8879820.0KF887982.1 Malus baccata WRKY75 (WRKY75) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009372253.12e-85PREDICTED: probable WRKY transcription factor 75
TrEMBLW8E2P53e-83W8E2P5_MALBA; WRKY75
STRINGXP_009372253.18e-85(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF115634110
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13080.17e-22WRKY DNA-binding protein 75