PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr015429.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 136aa    MW: 15457.2 Da    PI: 7.4939
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr015429.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM69.31e-2181262114
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  p+G++FhP+d+elv +yL +kv+g++++ e+vi+e+d+y + e +d+ +    +  ++++++yfF+k + ++ tg+r  r++ sg+Wk      ev +
  Pbr015429.1   8 PVGYKFHPRDDELVGYYLYNKVRGTPFRDENVIPEIDLYGSmEARDIWNnnggQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAEVQD 105
                  89**************************999*******965499999633444333467799**************************9999999988 PP

          NAM  95 k.kgelvglkktLvfykgrap 114
                    ++e++g  k   + + + p
  Pbr015429.1 106 PkTKETIGFFKRYQYKNTKYP 126
                  645556776666666655544 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.63E-225127IPR003441NAC domain
PROSITE profilePS5100522.9097135IPR003441NAC domain
PfamPF023652.4E-148132IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MAHSDTFPVG YKFHPRDDEL VGYYLYNKVR GTPFRDENVI PEIDLYGSME ARDIWNNNGG  60
QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AEVQDPKTKE TIGFFKRYQY  120
KNTKYPQESG CWLAP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr015429.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028945244.11e-69NAC domain-containing protein 68-like
TrEMBLA0A498IL633e-83A0A498IL63_MALDO; Uncharacterized protein
STRINGXP_009372720.13e-92(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55724133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.11e-13NAC domain containing protein 41