PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr018763.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family Trihelix
Protein Properties Length: 326aa    MW: 36885.4 Da    PI: 6.7798
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr018763.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix29.42.1e-0937105876
     trihelix   8 laLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 
                  l L++ +  +e +  ++ +  ++W+ +++++ + g++r+  q + kw+ l ++yk ik++e k ++ +s
  Pbr018763.1  37 LILVNEVAAVEADCLKALSSFQKWKIIAQNCFALGVSRTLDQYRRKWDALFGEYKGIKQWEAKCRASDS 105
                  5566666677777777778889****************************************9644433 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MKPEQTPSQL DRSHRSSGNQ RSTRSQVAPD WNPTDELILV NEVAAVEADC LKALSSFQKW  60
KIIAQNCFAL GVSRTLDQYR RKWDALFGEY KGIKQWEAKC RASDSYWVLG IERRKRNGLP  120
ENFDQELFSG IDKLVRVRGN QSDTDPDSDP EDEAGAEPEE ELDSEPESKR RKRRSIPQKS  180
CPKENSLRSC KREKPRETHA QEKPQETHAE EKPVGSGLKA IPTKSLAEEQ PQKSWVKKKL  240
TNSQRKEEAI SIEGQEKIAA MKLHESAELI RAIVTEKPDH EAAGVKSTGD LQTDFVRCQG  300
DRVIACLGDI VKTLDQLRHL VQECE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr018763.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009375735.10.0PREDICTED: trihelix transcription factor ASR3-like
TrEMBLA0A498JAN20.0A0A498JAN2_MALDO; Uncharacterized protein
STRINGXP_009375735.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67322633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.18e-52sequence-specific DNA binding transcription factors