PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019325.2
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 721aa    MW: 77029.9 Da    PI: 9.2378
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019325.2genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.21.2e-10243290147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrwqky 47 
                      r++W++ Ed+ l+ av+++G g+W+ I r      Rt+ q+  rw + 
      Pbr019325.2 243 RKKWSEAEDLELIAAVQKYGEGNWANILRGDFkGDRTPSQLAQRWKNI 290
                      789************************9852236***********997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129419.551238295IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-14239294IPR009057Homeodomain-like
SuperFamilySSF466892.3E-13239293IPR009057Homeodomain-like
SMARTSM007172.5E-11242293IPR001005SANT/Myb domain
PfamPF002493.0E-9243290IPR001005SANT/Myb domain
CDDcd116603.41E-15244292No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    Send to blast
MVEKTKEPKK GSITEEDTAT LLQRYAPTTV LALLQEVANS PEGKIDWNRL VAKTSTGISN  60
AREYQMLWRH LAYREALLDK LDNGAQPLMG NFHGNVFKLC ELINKFLAED DDSDLEYEVE  120
AHPAVSAEAS TEAAACVKFH TSILLLQFLC EAGLISAVLI SSGLSSDSSH QNGLTVEGLL  180
SMNLPNQSSR SQQNLQPTCS MQGKNITVPV SVLKNSLPVT TTTVETAEGD DALGNGMAPR  240
KRRKKWSEAE DLELIAAVQK YGEGNWANIL RGDFKGDRTP SQLAQRWKNI RKNNVDLNVG  300
GSSSKLSEAQ LAARHSLSIA LNMPNITANT IGTAGTSTHS KLAGTNATSN SLHFTTAEAK  360
LQSQKGLNPV KAEAKPQSQE GLNPAKTYQM GLSGSTTKAP VIAKKTIPKL TDSMVRAAAV  420
AAGARIAFPS DAASLLKAAQ AKNAVHIMPT VGSSTQSVKP GGMSTHSELP PNVHILRSSS  480
VATPLSTPSS TAATPSTTRP RSSKVLPQAS QHTPTKDAML SRQTNGVSCN LDAEQVQDGA  540
VISRDGPNDQ GQKDKRDSPD QKAESKNLST NAEKPVDTLK IESDETNSAV TGVQGEERKS  600
AKDNELPHSS VNVGASDPSV VDGCENRSAS EKQTDLAIET DGCKGKQVVY MKRPIKLACG  660
KIETGTQPPN TMILTQIATM PPGQTLGNVS FSQYSTPMEP IPGVKVFFKK PRRQKQKRKP  720
*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019325.2
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376211.10.0PREDICTED: uncharacterized protein LOC103964937
TrEMBLA0A498JAA20.0A0A498JAA2_MALDO; Uncharacterized protein
STRINGXP_009376210.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF31223256
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.13e-57MYB_related family protein