PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019429.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 330aa    MW: 37266.2 Da    PI: 8.7434
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019429.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.61e-3169122255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  prlrWtp+LH rF++ave+LGG+++AtPk +l+lm++kgL ++hvkSHLQ+YR+
  Pbr019429.1  69 PRLRWTPDLHLRFIHAVERLGGQDRATPKLVLQLMNIKGLNIAHVKSHLQMYRS 122
                  8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129413.00265125IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.1E-3065123IPR009057Homeodomain-like
SuperFamilySSF466891.51E-1467123IPR009057Homeodomain-like
TIGRFAMsTIGR015572.5E-2269124IPR006447Myb domain, plants
PfamPF002498.9E-970121IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MMGSQRGSEC SKTSPSDKQN EDGSESGENY SNGENSKPKN NGGSSSNSTV EESDQKKTSV  60
RPYVRSKMPR LRWTPDLHLR FIHAVERLGG QDRATPKLVL QLMNIKGLNI AHVKSHLQMY  120
RSKKIDDTGQ VLADHQGHLV ECGDKNIYNL SQLPMLQGYN RSHSTSFRYG SYGDTNSWTA  180
LENPRFSRSS TGFQGNWSTS STGNNAYNYL TSCSFGDHHP QSSWITRTLQ EECQLHNIRE  240
FLKPKEFITS FNTNRGPYRD SDTISKNLVQ DQSKMLKRKA SDCDDLDLDL SLRLTSKKND  300
EDHTHEVDSN LSLCLYSPPT SSKLRRLKE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A4e-1770124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B4e-1770124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C4e-1770124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D4e-1770124357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-1770124458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019429.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376409.10.0PREDICTED: two-component response regulator ARR18-like
TrEMBLA0A498K2100.0A0A498K210_MALDO; Uncharacterized protein
STRINGXP_009376409.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.14e-60G2-like family protein