PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr019521.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 184aa    MW: 19985.8 Da    PI: 8.0542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr019521.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.57.8e-142070256
          AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
                 ++kGVr +  +grWv+eIr p+    +  +++ g+++  ++Aa+a++aa  +++g+
  Pbr019521.1 20 RHKGVRMRA-WGRWVSEIRLPK----SgIKIWFGTYDALDQAARAYDAAVYCIHGA 70
                 58****998.**********94....3599***********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.65E-232079No hitNo description
PfamPF008471.1E-72069IPR001471AP2/ERF domain
SMARTSM003806.2E-252083IPR001471AP2/ERF domain
PROSITE profilePS5103219.7442077IPR001471AP2/ERF domain
SuperFamilySSF541713.14E-172178IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.101.7E-242178IPR001471AP2/ERF domain
PRINTSPR003673.3E-62132IPR001471AP2/ERF domain
PRINTSPR003673.3E-64359IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 184 aa     Download sequence    Send to blast
MDMGRTSTLK KVPRQRAPGR HKGVRMRAWG RWVSEIRLPK SGIKIWFGTY DALDQAARAY  60
DAAVYCIHGA SAEFNFPENK RPVPPTSSAV HVKMKDIQAI ATYFSSADVS VSTLVSSTMI  120
TQVPSDKPAS PNLLISTGMA TDYEVDCGSF APSCATGAAV TSPENLQLDD FLMLDTGWIA  180
EFY*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1319771372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00463DAPTransfer from AT4G31060Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr019521.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009376369.11e-134PREDICTED: ethylene-responsive transcription factor ERF015
TrEMBLM5XQ741e-88M5XQ74_PRUPE; Uncharacterized protein
STRINGXP_009376369.11e-133(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF154791011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.18e-35ERF family protein