PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr021197.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

NZZ/SPL

Protein Properties

Length: 373aa MW: 40234.9 Da PI: 8.8521

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr021197.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	23.1	1.3e-07	1	75	1	80
NOZZLE 1 matslffmstdqnsvrnpnellrntrlvvnssgeirte.tkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkk 80 mat +++m++++n+ ++p + l ++ e ++e tk ++ k s a + kk rg+gva+ler ++++ kk Pbr021197.1 1 MATPMLLMASERNTTKQPAKTLFGSYD------ESKSEpTKPTKTTKKSSTKASSNTKKQPQRGLGVAQLERLRLQDWKKM 75 89**************988876665......55556344455566666666667777778***********999885 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	8.9E-5	16	76	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence Send to blast
MATPMLLMAS ERNTTKQPAK TLFGSYDESK SEPTKPTKTT KKSSTKASSN TKKQPQRGLG 60 VAQLERLRLQ DWKKMTEVPQ LQPQPQVLNL PPLPHHHHHH QYQNPINLPD PLNSVPVQYG 120 ASRFNGPSVM NGCGGSAAST TCFYGLVGQR VGNGSGFGYA GGNNLVTNLD PSPYGVGAPD 180 PRVQSGAVYE TSRELSSMPK IQSLSSDCCD HCLKGIQKKR FISGDYMALN GWSDKSATVS 240 PINGSDFLGL NPETGSFGDR VVSRAARYLG RSNLVDDQGV GVRAVHRKGG SAGGGIFMEY 300 EFFPAADHQK SDEIKRGGTY PKLQTVGREE EEEASDISPA ATFKGYGIGA ADSYHDHQQH 360 HNPVDLSLKL SF*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence Send to blast

MATPMLLMAS ERNTTKQPAK TLFGSYDESK SEPTKPTKTT KKSSTKASSN TKKQPQRGLG  60
VAQLERLRLQ DWKKMTEVPQ LQPQPQVLNL PPLPHHHHHH QYQNPINLPD PLNSVPVQYG  120
ASRFNGPSVM NGCGGSAAST TCFYGLVGQR VGNGSGFGYA GGNNLVTNLD PSPYGVGAPD  180
PRVQSGAVYE TSRELSSMPK IQSLSSDCCD HCLKGIQKKR FISGDYMALN GWSDKSATVS  240
PINGSDFLGL NPETGSFGDR VVSRAARYLG RSNLVDDQGV GVRAVHRKGG SAGGGIFMEY  300
EFFPAADHQK SDEIKRGGTY PKLQTVGREE EEEASDISPA ATFKGYGIGA ADSYHDHQQH  360
HNPVDLSLKL SF*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr021197.1

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009377333.1	0.0	PREDICTED: uncharacterized protein LOC103965955
Refseq	XP_009377340.1	0.0	PREDICTED: uncharacterized protein LOC103965961
TrEMBL	A0A498KCW6	0.0	A0A498KCW6_MALDO; Uncharacterized protein
STRING	XP_009377333.1	0.0	(Pyrus x bretschneideri)
STRING	XP_009377340.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8365	17	23