PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pbr022933.1

Organism

Pyrus bretschneideri

Taxonomic ID

225117

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

bZIP

Protein Properties

Length: 246aa MW: 27175.3 Da PI: 7.4793

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr022933.1	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	28.6	3.1e-09	88	133	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 r rr N+eA r++R++Kka ++ Le++vk+L+ N++L +l+ Pbr022933.1 88 PRRRRSSGNKEAVRKYREKKKAHTAYLEDEVKKLQVLNQQLVRKLQ 133 57788888*********************************98876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.6E-6	80	151	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.0E-10	88	152	No hit	No description
SuperFamily	SSF57959	1.13E-6	89	133	No hit	No description
CDD	cd14686	6.59E-11	89	133	No hit	No description
PROSITE profile	PS50217	8.588	89	133	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	5.3E-11	89	133	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence Send to blast
MDDGEVVTSD HALLPNPNSS SNFHGSTYED TFFDEFLKTA RTCTHTHTCN PPGPEAAHTH 60 TCYHTHTQVL PSEDDDGTKN KEHSNLRPRR RRSSGNKEAV RKYREKKKAH TAYLEDEVKK 120 LQVLNQQLVR KLQGQAILEA ERLRLRGLLL ELRGKIDTEL GAFPFQKQCN SNTYFEDSQC 180 NLQSSVGAMG LRCQTDLPCF CPPVGSSVQA SIGARGETMV PSGGNCQPAV IDCRANTNEA 240 STQAK*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr022933.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009354399.1	0.0	PREDICTED: basic leucine zipper 23
TrEMBL	A0A498KIC0	1e-149	A0A498KIC0_MALDO; Uncharacterized protein
STRING	XP_009354398.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2567	32	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16770.1	9e-38	bZIP family protein