PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr023119.1
Common NameWRKY7
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 733aa    MW: 79541.3 Da    PI: 6.415
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr023119.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.74.2e-32312369260
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                  +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++v+ei+Y+g Hnh+k
  Pbr023119.1 312 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSQ-EGHVTEIIYKGAHNHPK 369
                  7****************************************.***************85 PP
2WRKY102.82e-32523581159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+
  Pbr023119.1 523 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 581
                  59********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1182902.75E-25310370IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-28310370IPR003657WRKY domain
SMARTSM007748.3E-36311369IPR003657WRKY domain
PROSITE profilePS5081123.135312370IPR003657WRKY domain
PfamPF031061.1E-24312368IPR003657WRKY domain
Gene3DG3DSA:2.20.25.809.3E-37508583IPR003657WRKY domain
SuperFamilySSF1182901.96E-28515583IPR003657WRKY domain
PROSITE profilePS5081138.32518583IPR003657WRKY domain
SMARTSM007741.9E-37523582IPR003657WRKY domain
PfamPF031067.5E-25524581IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0009942Biological Processlongitudinal axis specification
GO:0030010Biological Processestablishment of cell polarity
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    Send to blast
MAGIDDNIAI IGDWVPPSPS PRAFFSSMLV DDIGSRSILE PHSNNRTEDF FLGAREGDNN  60
GKNLSQGNVS GEDITEVGSF PEYKSNSRGG LVERIAARAG FNAPRLNTES IRSSDLSHTS  120
DIRSPYLTIP PGLSPTTLLD SPVFLSNSLA QPSPTTGKFS FVSNGHGRSS TLMPESPDKN  180
NFFEDINASF AFKPVAESGS FFLGPTGKMG SGTFQQQSFT SMEVSVQSEN SSQSIEPTKV  240
QNQNTNNLQH QADFSRTSTE KDNGAYTISA DPRAFDTVGG STEHSPPLDE QPDEERGSGD  300
SMAAAGGGTA SEDGYNWRKY GQKQVKGSEY PRSYYKCTHP NCQVKKKVER SQEGHVTEII  360
YKGAHNHPKP PPNRRSAAMG SSNPLVDMRT DIPEQGGADG DSIWANTQKG NVGGPDWKHD  420
NLEVTSSASV GPDYCNQSSM QAQNGTHHKS GDVVDASSTF SNDEEEDDRG THGSVSLAYD  480
GEGDESESKR RKIEAYATEM SGATRAIREP RVVVQTTSEV DILDDGYRWR KYGQKVVKGN  540
PNPRSYYKCT NAGCTVRKHV ERASHDLKSV ITTYEGKHNH DVPAARNSSH VNSGPSSNMP  600
GQTSTIQTHP HRPEPQVHNS MGRFERPSSM GSFNLPGRQQ MGPSHAFSFG MNQPGFANLS  660
MAGLGPGQPK LSVLPSHHPY FAQQRHQVNE MAFMLPKGEP KVEPMSEPGL IMSNGSSVYQ  720
QLMSRLPLGP QM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-36312584878Probable WRKY transcription factor 4
2lex_A2e-36312584878Probable WRKY transcription factor 4
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Regulates WOX8 and WOX9 expression and basal cell division patterns during early embryogenesis. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Required to repolarize the zygote from a transient symmetric state. {ECO:0000269|PubMed:21316593}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00071PBMTransfer from AT5G56270Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr023119.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKJ9503670.0KJ950367.1 Pyrus x bretschneideri WRKY domain class transcription factor (WRKY7) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009379094.10.0PREDICTED: probable WRKY transcription factor 2 isoform X1
RefseqXP_009379095.10.0PREDICTED: probable WRKY transcription factor 2 isoform X1
RefseqXP_009379096.10.0PREDICTED: probable WRKY transcription factor 2 isoform X1
SwissprotQ9FG770.0WRKY2_ARATH; Probable WRKY transcription factor 2
TrEMBLA0A089FXL10.0A0A089FXL1_9ROSA; WRKY domain class transcription factor
STRINGXP_009379094.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF95243443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.10.0WRKY DNA-binding protein 2
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Ueda M, et al.
    Transcriptional integration of paternal and maternal factors in the Arabidopsis zygote.
    Genes Dev., 2017. 31(6): p. 617-627
    [PMID:28404632]
  4. Lei R, et al.
    Arabidopsis WRKY2 and WRKY34 transcription factors interact with VQ20 protein to modulate pollen development and function.
    Plant J., 2017. 91(6): p. 962-976
    [PMID:28635025]