PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr023636.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 118aa    MW: 12923.8 Da    PI: 11.512
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr023636.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP240.37.9e-134477138
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgt 38
                 + ++GVr++  +g+WvAeIr+p   + r +r +lg+f t
  Pbr023636.1 44 CSFRGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNT 77
                 579****999.**********8...3.35********99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.96E-164477No hitNo description
PfamPF008475.1E-84479IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-174578IPR001471AP2/ERF domain
PROSITE profilePS5103214.1174577IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-114578IPR016177DNA-binding domain
SMARTSM003804.5E-1045102IPR001471AP2/ERF domain
PRINTSPR003671.4E-64657IPR001471AP2/ERF domain
PRINTSPR003671.4E-66884IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    Send to blast
MEKEERKVVN KRGGGGGGGG GGDSMERSRK GCMKGKGGPE NALCSFRGVR QRTWGKWVAE  60
IREPNRGARL WLGTFNTSTR QHLLMMKQLE NSTAPPPSST CQTTTSTRRP HRCHLLI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr023636.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008389032.21e-38dehydration-responsive element-binding protein 2D
TrEMBLA0A482LTH06e-35A0A482LTH0_9ROSA; Transcription factor ERF28
STRINGXP_008389032.15e-38(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18450.11e-31ERF family protein