PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr023656.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 439aa    MW: 49169.3 Da    PI: 5.3433
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr023656.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.51.4e-33208262155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  k+r+rWt+eLHe+Fveav++LGGse+AtPk il+lmkv+gLt++hvkSHLQkYR+
  Pbr023656.1 208 KARMRWTQELHEAFVEAVNHLGGSERATPKGILNLMKVEGLTIYHVKSHLQKYRT 262
                  68****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.58205265IPR017930Myb domain
SuperFamilySSF466891.0E-17206262IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-30207264IPR009057Homeodomain-like
TIGRFAMsTIGR015571.4E-25208262IPR006447Myb domain, plants
PfamPF002491.8E-9210261IPR001005SANT/Myb domain
PfamPF143795.4E-19293339IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 439 aa     Download sequence    Send to blast
MLPQASSPGN LFSSSSRPND IHISSVPSCE RRPQNSPFIF KSQVDENTEK SLSQPCSSNS  60
PLSEVQPTTL ISYPEEHRDI SWCPDSLQEF LHFSENVPDQ NGLVDSSAGV ITSEEHAGKT  120
NWSDWDPLIS FDDTLDPNWE LPVDVDAIDP KPKELSKPYS DIRVQQPPVQ QLQLQVQQHQ  180
PQVHQHQPLQ SLEFRSSPEP LSSAPPTKAR MRWTQELHEA FVEAVNHLGG SERATPKGIL  240
NLMKVEGLTI YHVKSHLQKY RTARYKPESS EGSCEKVSTP IEETNPLDMK GSMGITEALR  300
LQVELQKRLH EQLENQRKLQ LQIEEQGKCL EKMFEQQRKF EDNRVKSGSS TVDDHSTPLS  360
NIACSSRGDD KPETSKHHPD KTAISTPLEN GSQDASSKAQ EHECPEDPDG VESGALRTKR  420
ARNGSNKQNS QELSRPTQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J9e-31208266260Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr023656.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009379743.10.0PREDICTED: protein PHR1-LIKE 1-like isoform X1
TrEMBLA0A498IM190.0A0A498IM19_MALDO; Uncharacterized protein
STRINGXP_009379743.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15123498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G29000.39e-73G2-like family protein