PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr025944.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 178aa    MW: 19581.8 Da    PI: 4.5189
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr025944.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.51.6e-181666155
          AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                 s y+GVr +k +g+Wv+eIr+p   g ++r++lg+f t+e+Aa+a++ a+  ++g
  Pbr025944.1 16 STYRGVRKRK-WGKWVSEIREP---GTKTRIWLGSFETPEMAAAAYDVAAFHFRG 66
                 56*****999.**********8...325**********************99988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000186.46E-241676No hitNo description
SuperFamilySSF541716.15E-231675IPR016177DNA-binding domain
PROSITE profilePS5103223.7621774IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.9E-321775IPR001471AP2/ERF domain
SMARTSM003801.6E-391780IPR001471AP2/ERF domain
PfamPF008479.9E-121766IPR001471AP2/ERF domain
PRINTSPR003673.5E-101829IPR001471AP2/ERF domain
PRINTSPR003673.5E-104056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MGDPANSSND YGPASSTYRG VRKRKWGKWV SEIREPGTKT RIWLGSFETP EMAAAAYDVA  60
AFHFRGRDAR LNFPELVSNL PRPASSTPDD IRMAAQEAAL MLRGSGACAV EGHDQVEGSS  120
SNVGPVTVRL SPSQIQAINE SPLESPKMWM QMAEPTMFSD DFENQWEDMP NDSLWDP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-161879668ATERF1
3gcc_A1e-161879668ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr025944.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009335466.11e-129PREDICTED: ethylene-responsive transcription factor ERF021-like
SwissprotQ9C9I25e-68ERF21_ARATH; Ethylene-responsive transcription factor ERF021
TrEMBLA0A498JF791e-115A0A498JF79_MALDO; Uncharacterized protein
STRINGXP_009335466.11e-129(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71450.11e-63ERF family protein