PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr026000.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 251aa    MW: 27955.1 Da    PI: 5.6505
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr026000.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.22.3e-19129179255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +++GVr+++ +g+++AeIrdp++ng  +r +lg++ t e+Aa a+++a+ k++g
  Pbr026000.1 129 HFRGVRRRP-WGKYAAEIRDPKKNG--ARMWLGTYETTEGAALAYDQAAFKMRG 179
                  69*******.***********9998..*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.86E-29129189No hitNo description
SMARTSM003806.7E-38129193IPR001471AP2/ERF domain
PfamPF008471.2E-13129179IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.3E-31129188IPR001471AP2/ERF domain
PROSITE profilePS5103223.446129187IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-22129188IPR016177DNA-binding domain
PRINTSPR003674.9E-13130141IPR001471AP2/ERF domain
PRINTSPR003674.9E-13169189IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MYQDICLEFD FALLESIQQH LLDDNFDTTF QDSSPTASGS PSPMYCRSLS FSTLFSTESW  60
RDVLFKVELE DTNEVVGALS DGTDGWSPSS DHHYVDVIDT TPVKPEPQEV VREEIVVARE  120
THMPPSQHHF RGVRRRPWGK YAAEIRDPKK NGARMWLGTY ETTEGAALAY DQAAFKMRGS  180
KAKLNFPHLI GSEGCEPVRI IAKRRAPEFS TSSSSSESGS PKPKRRNTGL RSVAEAESSS  240
TSRVEMVEKS *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-29129187260ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
2gcc_A3e-29129192568ATERF1
3gcc_A3e-29129192568ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr026000.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU7324550.0GU732455.1 Malus x domestica AP2 domain class transcription factor (AP2D31) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018498326.10.0PREDICTED: ethylene-responsive transcription factor 2-like
RefseqXP_018498327.10.0PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ404792e-51ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLA0A498JI661e-154A0A498JI66_MALDO; Uncharacterized protein
STRINGXP_008376227.11e-153(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51233157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-45ethylene-responsive element binding factor 13
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]