PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr027716.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family C2H2
Protein Properties Length: 304aa    MW: 30343.6 Da    PI: 6.1349
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr027716.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.0007210232223
                  EETTTT.EEESSHHHHHHHHHHT CS
      zf-C2H2   2 kCpdCg.ksFsrksnLkrHirtH 23 
                  +Cp C+   Fs++  L  H+r+H
  Pbr027716.1 210 TCPVCNrSDFSSWKALFGHQRSH 232
                  6*****889*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MTNSNTTTTT NQGSSAEGQQ PLNENVSSNV TEAAPTAPPS THAPTPTPPP PQSTGQVNAG  60
GGDGGFLRSS GTPPVRTHLT PGQFNVGGGF ATGVSSVTPP GPNKGSPGRG SPSPSRGTST  120
PRRGSPSGGR RTPSRGSKSP PSGRGSPSSL GRGSSAAAGN NSQIGGSSFT PVRVEISLGG  180
GLAAEGSMAV GGQLGKRKAE VKAPEGMTPT CPVCNRSDFS SWKALFGHQR SHPERPYRGA  240
FPPPGQQQGE ASNAANVREA RDVEEDNEGR GGIDLNMPPP DDDDDDVTDD NMDGGDGGGG  300
AEA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr027716.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009337123.10.0PREDICTED: uncharacterized protein LOC103929627
TrEMBLA0A498HVV41e-167A0A498HVV4_MALDO; Uncharacterized protein
STRINGXP_009337123.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF102022128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35280.17e-09C2H2-like zinc finger protein