PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr027776.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 95aa    MW: 10983.5 Da    PI: 5.7292
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr027776.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.84.3e-07958348
                     SS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqkyl 48
                      WT +E + +  a + +  +      W++ +  ++ g++  q+ks++ ++l
      Pbr027776.1  9 QWTWQENKVFETALATYNIHciekgEWEKLSLLVP-GKSIDQIKSHFMQLL 58
                     7****************999***************.***********9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.65E-8862IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.609.4E-4959IPR009057Homeodomain-like
CDDcd001672.02E-41058No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    Send to blast
MAGGVSSDQW TWQENKVFET ALATYNIHCI EKGEWEKLSL LVPGKSIDQI KSHFMQLLKD  60
LEAIESDQEP LPDYKDDLFL MTKKGSRRQR QQRQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr027776.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A498JBT48e-54A0A498JBT4_MALDO; Uncharacterized protein
STRINGXP_004308717.11e-23(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1753345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49010.12e-15MYB family protein