PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030322.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family TALE
Protein Properties Length: 257aa    MW: 28095.6 Da    PI: 7.5843
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030322.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox291.8e-09771102154
                  HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                  k +yp+ +++  LA+++gL+ +qV++WF N R +
  Pbr030322.1  77 KLKYPTDTDKHMLATQTGLSRNQVSNWFINARVR 110
                  679*****************************87 PP
2BELL55.91.1e-181433072
         BELL 30 lqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72
                 +q+v++sFe vagl sa+pY+s+Al++++rhFrcL + i++q+
  Pbr030322.1  1 MQMVVASFESVAGLSSATPYISMALNTVARHFRCLTNSIKDQL 43
                 9***************************************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF075266.9E-13139IPR006563POX domain
SMARTSM003896.3E-466118IPR001356Homeobox domain
CDDcd000866.78E-1072115No hitNo description
PROSITE profilePS5007111.14372114IPR001356Homeobox domain
SuperFamilySSF466893.76E-1277121IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.3E-1780118IPR009057Homeodomain-like
PfamPF059203.7E-1380110IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MQMVVASFES VAGLSSATPY ISMALNTVAR HFRCLTNSIK DQLKHIRKAL GEENMSSAVT  60
AAVTAGCSSK GEKNLAKLKY PTDTDKHMLA TQTGLSRNQV SNWFINARVR VWKPMVEEIH  120
MLETRGGSHE AGQDPINKDG NSANEGTSSR PNNDHQLSMN MMPDRQLECS GDAEQQNQEM  180
KRSRLECQVP SSMDGGLMGF VPYQRGGFEA GGLGAVSLTL GLRHGVESAQ QQQQLQQQED  240
QLRRQLGGQV VRDYVG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030322.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009356886.11e-165PREDICTED: BEL1-like homeodomain protein 9 isoform X1
RefseqXP_009356887.11e-165PREDICTED: BEL1-like homeodomain protein 9 isoform X1
RefseqXP_009356888.11e-165PREDICTED: BEL1-like homeodomain protein 9 isoform X2
TrEMBLA0A498IQ861e-160A0A498IQ86_MALDO; Uncharacterized protein
STRINGXP_009356886.11e-164(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34813257
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27990.11e-36BEL1-like homeodomain 8