PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030521.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 252aa    MW: 28915.5 Da    PI: 8.4197
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030521.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.33.6e-1580131155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ++ +hn+ Er RR++iN+ ++ Lr+llP +   + kKls   +  +A +YI +Lq
  Pbr030521.1  80 KKLNHNASERDRRKKINNLYASLRSLLPAD---QTKKLSIPNTISHALKYIPELQ 131
                  6789**************************...9******************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.09479130IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.4E-1380147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.33E-1680147IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.89E-1080135No hitNo description
PfamPF000102.1E-1280131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-985136IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MLALSPPLFS TIGWSLDQDS ISHENHNYFY SKDITTTNDD QTADSFLHLL PSHHPKVDLD  60
RSTPSITVTG DYSSVCPMAK KLNHNASERD RRKKINNLYA SLRSLLPADQ TKKLSIPNTI  120
SHALKYIPEL QKQVEGLNRK REELLSRASK QEDAMHKEKK IKSTARSSQS AVSTYRLNDR  180
EVAIQISTFK THNNLLFEIL QHLEEEGLQL ENASFFESYG GRVFYNLHLQ VDRTYRLERE  240
NLSEKLMSFY A*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030521.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT9872280.0KT987228.1 Pyrus calleryana bHLH transcription factor (IRO2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009339562.10.0PREDICTED: transcription factor ORG2-like
TrEMBLA0A165CPQ30.0A0A165CPQ3_PYRCA; BHLH transcription factor
STRINGXP_009339562.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.14e-49bHLH family protein