PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030523.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 127aa    MW: 14285.8 Da    PI: 7.0882
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030523.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.2e-1176105130
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPka 30 
                  ++ +hn+ Er RR++iNs ++ Lr+llP +
  Pbr030523.1  76 KKLNHNASERDRRKKINSLYSSLRSLLPAD 105
                  6789************************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.88E-968117IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088810.99575126IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-876105IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-976113IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    Send to blast
MLALSPPMFS TIGWPIDQDL TSHDYYKDHI TTTNDQTAES SSLHILPSGH PQSELDRSTP  60
STTISGEYSS VSPVAKKLNH NASERDRRKK INSLYSSLRS LLPADQPVRS KMNSFINIWD  120
TRNYYE*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030523.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009339563.17e-66PREDICTED: transcription factor ORG2-like
TrEMBLA0A498HZQ12e-55A0A498HZQ1_MALDO; Uncharacterized protein
STRINGXP_009339563.13e-65(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.12e-17bHLH family protein