PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030607.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 178aa    MW: 19438.1 Da    PI: 6.6647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030607.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.91.6e-15114161253
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53 
                  +y+GV++ + +g+WvAeIr+p++   ++  +lg+f tae+Aa a++ a+  l
  Pbr030607.1 114 RYRGVHQQS-KGKWVAEIREPRK---CTCKWLGTFATAEDAACAYDLAAIIL 161
                  59****999.7*********854...8*********************9765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.1E-8114158IPR001471AP2/ERF domain
CDDcd000189.91E-23114173No hitNo description
PROSITE profilePS5103217.886114171IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-17114171IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.107.4E-23114171IPR001471AP2/ERF domain
SMARTSM003801.7E-25114177IPR001471AP2/ERF domain
PRINTSPR003671.4E-5115126IPR001471AP2/ERF domain
PRINTSPR003671.4E-5137153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006970Biological Processresponse to osmotic stress
GO:0009414Biological Processresponse to water deprivation
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0009744Biological Processresponse to sucrose
GO:0009749Biological Processresponse to glucose
GO:0010119Biological Processregulation of stomatal movement
GO:0010353Biological Processresponse to trehalose
GO:0010449Biological Processroot meristem growth
GO:0010896Biological Processregulation of triglyceride catabolic process
GO:0031930Biological Processmitochondria-nucleus signaling pathway
GO:0032880Biological Processregulation of protein localization
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048316Biological Processseed development
GO:0048527Biological Processlateral root development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MSTSEDEEVE ELEDDDIIGK ALQKCAKISV DLRKKLQGSS ALAVSDWYTE VEAASVKIVN  60
QAITYLMLLK HLNDDLGPHL IVCPASVLEI GKENLKSSAH HSFSKGGPDN KKFRYRGVHQ  120
QSKGKWVAEI REPRKCTCKW LGTFATAEDA ACAYDLAAII LYASRAQLNL QPSGSSS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00674SELEXTransfer from GRMZM2G093595Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030607.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMap-Retrieve
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF88472940
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.17e-21ERF family protein