PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr030932.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 433aa    MW: 47476.9 Da    PI: 9.2639
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr030932.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.78.1e-20250299356
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                  ++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  Pbr030932.1 250 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAIAYDTAAYILRGE 299
                  8******9.**********955...5************************9997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.13E-30248308No hitNo description
Gene3DG3DSA:3.30.730.102.0E-30249307IPR001471AP2/ERF domain
PROSITE profilePS5103221.997249306IPR001471AP2/ERF domain
SuperFamilySSF541712.29E-21249307IPR016177DNA-binding domain
SMARTSM003806.7E-35249312IPR001471AP2/ERF domain
PfamPF008471.8E-12250299IPR001471AP2/ERF domain
PRINTSPR003671.1E-10250261IPR001471AP2/ERF domain
PRINTSPR003671.1E-10272288IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MEEKFPKMET FIEKQLPYSY FPRMATSNNI GSNLFGDHPA SWGGSGSKSP LSSESSSSSA  60
EDVSLSGSNL INNTSSPFVP LNFLETFPQL TRAQVSDQPP TSPPSLSSKP SRFPKLTLFL  120
QQPSLLDPSS SSSSPSSSSS MQVEVVNSLG KTKRCNELSS LLIPSFPAPQ AIDQIQHQPG  180
MIEWLKINQT LANHSSKGFN DYWLSTTKTQ PMKHTGRSSS RLHQQQINQQ QKQPNNNLSS  240
SSSSSQGKLF RGVRQRHWGK WVAEIRLPRN RTRVWLGTFD TAEEAAIAYD TAAYILRGEH  300
AQLNLPDLKH QLKASALKGT TAALLEAKLQ AISSSQAHKK AIKESSSSES ASSNKHSAGD  360
GGDHNNLMIN SNLSQNATRK EWQFELESKV GSHHHHHQQD LVSAADVDAV QLSRMPSLDM  420
DMIWDALLVS DS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A9e-20245306163ATERF1
3gcc_A9e-20245306163ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr030932.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009374592.10.0PREDICTED: ethylene-responsive transcription factor ERF062
TrEMBLA0A1P8VHU40.0A0A1P8VHU4_9ROSA; DREB6.9
TrEMBLA0A498K4A50.0A0A498K4A5_MALDO; Uncharacterized protein
STRINGXP_009374592.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101023141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.13e-50ERF family protein