PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr031912.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 306aa    MW: 33897.1 Da    PI: 9.9611
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr031912.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.72.2e-32102155255
      G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  prlrWtp+LH++Fv+ave+LGG+++AtPk +l++m+vkgL ++hvkSHLQ+YR+
  Pbr031912.1 102 PRLRWTPDLHRCFVHAVERLGGEQRATPKMVLQIMNVKGLNISHVKSHLQMYRS 155
                  8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.88898158IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.6E-3198157IPR009057Homeodomain-like
SuperFamilySSF466891.15E-14100156IPR009057Homeodomain-like
TIGRFAMsTIGR015572.3E-23102156IPR006447Myb domain, plants
PfamPF002497.5E-7103154IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MKDQAMERIE GDDHRHQSSS FLKRSPSSSV DNVDQKPHTS SFDDGDGVTP NRSTAQGKHL  60
VVHGYHHHFP AAARHRQMIG SLSKSSLSSS TPVRPYVRSR MPRLRWTPDL HRCFVHAVER  120
LGGEQRATPK MVLQIMNVKG LNISHVKSHL QMYRSMKHEQ GIQAAALAAQ KNGMLQVSEH  180
SNNSNFLKPI NIAQPVYIEG LDTKNTSPLA KRKDETKPLV LPYQAPSSFI VDNDLLKRCT  240
DNIGQESNHK ELEDLGSTKS EYDARIMSVS LNASSSKASR ELLRFSKAAG NSDANDVSLE  300
LTLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-18103158358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-18103158358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-18103158358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-18103158358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J4e-18103158459Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr031912.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028964811.10.0uncharacterized protein LOC103446871 isoform X1
TrEMBLA0A498IWS40.0A0A498IWS4_MALDO; Uncharacterized protein
STRINGXP_008384248.10.0(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93812840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.15e-33G2-like family protein