PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr033088.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family MYB_related
Protein Properties Length: 104aa    MW: 11730 Da    PI: 4.7588
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr033088.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding331.3e-102455132
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg 32
                     +g+WT+eEd  l+++v+ +G g+W+++ar  g
      Pbr033088.1 24 KGPWTAEEDGFLIEYVRFHGEGRWNSVARLAG 55
                     79***************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-101853IPR009057Homeodomain-like
PROSITE profilePS500907.1891952IPR017877Myb-like domain
SuperFamilySSF466893.09E-91955IPR009057Homeodomain-like
SMARTSM007170.00362363IPR001005SANT/Myb domain
PfamPF002491.1E-82455IPR001005SANT/Myb domain
CDDcd001673.68E-62655No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    Send to blast
MYLGMTVGGQ HRGWGMIKDE GWRKGPWTAE EDGFLIEYVR FHGEGRWNSV ARLAGFFYSM  60
LDGNIVNVSV PEAASSNEDN FIWDGLWNLT DVHANFINTT RQS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr033088.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028951947.18e-32myb-related protein 305-like
TrEMBLA0A498HR284e-29A0A498HR28_MALDO; Uncharacterized protein
STRINGXP_009357956.16e-26(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2785933
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.18e-18myb domain protein 305