PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr034497.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family GeBP
Protein Properties Length: 194aa    MW: 21348.9 Da    PI: 4.546
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr034497.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57362.51.1e-19671471898
       DUF573  18 Glidfkaktgkspsddidafyefvkksisfkvsksqlve....KirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 
                  G+i+fk+k+g+ + +++  f ef+kk ++++ s++qlve    Kirr KkK++  ++    g++p+fsk+h+ k+++l kkiWgs
  Pbr034497.1  67 GIIEFKSKKGVAANSNMAPFLEFIKKDLQVDLSTDQLVEkltdKIRRVKKKYQAGED----GEDPVFSKPHELKCLDLWKKIWGS 147
                  9***********************************976222268999999987655....6*********************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.0E-1766146IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    Send to blast
MAPKKLVEDP PPAVVEYFDE ETVDEDEEEE DDAVEAEVSK AKSVDLNDDE LGGGRRGRKA  60
LCGCSEGIIE FKSKKGVAAN SNMAPFLEFI KKDLQVDLST DQLVEKLTDK IRRVKKKYQA  120
GEDGEDPVFS KPHELKCLDL WKKIWGSEGN GIDSNAKGGK RKPPRKNNKV NNDTVLALPI  180
SEVTEERGAE ECG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr034497.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017179502.23e-72STOREKEEPER protein-like, partial
TrEMBLA0A498HB532e-68A0A498HB53_MALDO; Uncharacterized protein
STRINGXP_008342106.18e-70(Malus domestica)
STRINGXP_008353581.11e-69(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF139661119
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00390.16e-15DNA-binding storekeeper protein-related transcriptional regulator