PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr035841.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 447aa    MW: 50170.9 Da    PI: 8.3756
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr035841.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.64.4e-31250304155
      G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                  k+r+rW+++LHe+Fve+v++LGG++kAtPk+il++m+++gLt+ hvkSHLQkYR+
  Pbr035841.1 250 KTRIRWNQDLHEKFVECVNRLGGADKATPKAILKMMGLDGLTIFHVKSHLQKYRI 304
                  68****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.31247307IPR017930Myb domain
SuperFamilySSF466892.69E-16248304IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.1E-27248305IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-22250305IPR006447Myb domain, plants
PfamPF002491.1E-8254303IPR001005SANT/Myb domain
PfamPF143797.5E-19335381IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MNGKKIDCQE RNQQSHELIG EYGFELGNQS CQIFGQQQQQ AWNNMGIWVQ QPTMDNEVSL  60
LQNLGPPKTP SSIISRFESP VSAFYATELY MGGFPQYDSQ AGQNPQFPSG QSNNESYSSM  120
NSSEQDPNFD IRNTLQSIVK SQPSSYQYHK SSEKCNRIPA SDLSGSKLFA HQSNKLHGDH  180
NTTTVRRPSF SLPSKENQDQ VGYCNSFTTS PVTQLSFFSG QGKQPPRISS RQVSDCYGNS  240
PSSSPVLSSK TRIRWNQDLH EKFVECVNRL GGADKATPKA ILKMMGLDGL TIFHVKSHLQ  300
KYRIAKYLPD PAEGKSEKRT TLNVEPQLNV KTCLQIKEAL QLQLDVQRRL HEQLETQRKL  360
QLRIEEQGKR LRKMFDLQQQ TSSNPLKAQN SDVTCHEASP SNSLDDTDQL STPEGTYLDT  420
ASVKLLVQWK SQQDNVLPVP LSSRSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-22250307259Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr035841.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009369711.10.0PREDICTED: myb family transcription factor PHL5-like isoform X1
TrEMBLA0A498IGE10.0A0A498IGE1_MALDO; Uncharacterized protein
STRINGXP_009369711.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37403465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.18e-68G2-like family protein