PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr036661.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family HB-other
Protein Properties Length: 85aa    MW: 9606.34 Da    PI: 10.6933
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr036661.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.11.7e-0960843054
                 HHHHHHHCTS-HHHHHHHHHHHHHH CS
     Homeobox 30 reeLAkklgLterqVkvWFqNrRak 54
                 ++  Ak+l+L  rqV vWFqN+R +
  Pbr036661.1 60 KQAFAKQLNLRSRQVEVWFQNKRSR 84
                 6789*******************87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-8221IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-85784IPR009057Homeodomain-like
PfamPF000466.7E-76084IPR001356Homeobox domain
PROSITE profilePS5007111.0946084IPR001356Homeobox domain
SuperFamilySSF466891.84E-66084IPR009057Homeodomain-like
CDDcd000868.10E-56484No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    Send to blast
MLSKEQSLLL DETFKKLNTL NPVRFCCLDK GVLVFTDGLI SGNGAILAVK QGCFVFQKLK  60
QAFAKQLNLR SRQVEVWFQN KRSR*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr036661.1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60390.13e-14homeobox-leucine zipper protein 3