PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr037283.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 78aa    MW: 8897.32 Da    PI: 10.1028
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr037283.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM33.71.1e-10954246
          NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwd 46
                 + GfrFhPtd+elv+ yL+ ++ + k   + +i+e++++ ++ Pw 
  Pbr037283.1  9 TLGFRFHPTDQELVSSYLRDRALSGKPLGKPFIQEFNLFgQTPPWV 54
                 67*****************9988777555577****9872456665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-11453IPR003441NAC domain
PROSITE profilePS5100513.439877IPR003441NAC domain
PfamPF023659.6E-71149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
MEVGYYGMTL GFRFHPTDQE LVSSYLRDRA LSGKPLGKPF IQEFNLFGQT PPWVVWEQFG  60
GKFPTRSRLV LLLRAAF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr037283.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028954569.11e-36NAC domain-containing protein 41-like
TrEMBLA0A498K5436e-33A0A498K543_MALDO; Uncharacterized protein
STRINGXP_009344383.12e-35(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10480.32e-08NAC domain containing protein 50