PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr038620.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 286aa    MW: 30837 Da    PI: 5.1391
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr038620.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-182373256
          AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                 ++ GVr+++ +grWvAeI+d      ++ r +lg+f+tae+Aa+a++ a+++l+g+
  Pbr038620.1 23 RFVGVRQRP-SGRWVAEIKD----SlQKVRLWLGTFDTAEDAARAYDDAARALRGA 73
                 689******.7*********....4456*************************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.9E-122372IPR001471AP2/ERF domain
CDDcd000183.38E-172380No hitNo description
SMARTSM003806.7E-362386IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-292380IPR001471AP2/ERF domain
PROSITE profilePS5103220.5082380IPR001471AP2/ERF domain
PRINTSPR003678.1E-82435IPR001471AP2/ERF domain
SuperFamilySSF541714.51E-202481IPR016177DNA-binding domain
PRINTSPR003678.1E-84662IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MGLREQNDGV RRSKKSSTRG HHRFVGVRQR PSGRWVAEIK DSLQKVRLWL GTFDTAEDAA  60
RAYDDAARAL RGANARTNFE LPQSNGAGNG GAGVAENVPF SFEAVCGNEV EAEGLLGALR  120
AKLQDGKVIN RVLPQPPQGN RGTKAAPSPV DPRGAVTESV NPRPPHMENP VVLDNQWQLQ  180
VHPAPSNQTM VWANESQVAY EQVQNWSTWP NNSMPYVPEQ CSMELPLPAV GTQLLSQIDG  240
SADGGDDGDG GWCSDQQQFL HCDGSNWGGA NANWDPPFYA SSVLG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-1421881280Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr038620.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009360238.10.0PREDICTED: dehydration-responsive element-binding protein 2E-like
TrEMBLA0A498I7961e-140A0A498I796_MALDO; Uncharacterized protein
STRINGXP_009360238.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF113333035
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.11e-16related to AP2 11