PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr039686.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 211aa    MW: 23129.1 Da    PI: 10.4777
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr039686.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.3e-104692354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
          HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 ++h+e E+rRR riN  + +Lr +lP +      K++Ka++L ++v+ +++L
  Pbr039686.1 46 KKHSESEKRRRMRINGQYTTLRAILPDL-----IKMDKASVLGETVRKVREL 92
                 68*************************9.....6************988877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474598.77E-1235101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088813.5794392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-84692IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.72E-94697No hitNo description
Gene3DG3DSA:4.10.280.102.1E-114795IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-94998IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550216.98E-5136197No hitNo description
Gene3DG3DSA:3.30.70.2609.3E-6137181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MQSTLSYYPK QISFPKGQGV FPTNNIYNKN FFKPKSKAEA KVIAAKKHSE SEKRRRMRIN  60
GQYTTLRAIL PDLIKMDKAS VLGETVRKVR ELKKALAEVE AACHCGDRRD ECVLPGGVDK  120
LSVEQCEGEK GGLVKATFSC EDRLGLISDM TRALSCVKGR VVRAEMVTVG GRSKNALWVQ  180
GLGGGNEGVV ALKRALKVVI DRPVLPRNII *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr039686.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008235541.11e-117PREDICTED: transcription factor bHLH131-like
TrEMBLA0A498HTJ41e-139A0A498HTJ4_MALDO; Uncharacterized protein
STRINGXP_009345719.11e-151(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF126113032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38070.11e-38bHLH family protein