PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr040816.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family G2-like
Protein Properties Length: 223aa    MW: 25585.5 Da    PI: 9.4471
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr040816.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.82e-121338126
      G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                 k+rlrWt+eLH+rFveav++LGG+++
  Pbr040816.1 13 KERLRWTQELHDRFVEAVTKLGGPDR 38
                 68**********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.6E-101238IPR009057Homeodomain-like
TIGRFAMsTIGR015572.9E-81338IPR006447Myb domain, plants
PfamPF143791.2E-792122IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    Send to blast
MGSSRSASSG ANKERLRWTQ ELHDRFVEAV TKLGGPDRYL EGHERLWTDR LPQQKPFAGL  60
FSFPLSRPXX XXPVLRYDQS TESQSSFQSR LVIQVNRRLS DQHEVQKSLK QKFEAQGRFL  120
ERYSAERHNT NKNRPILITK PKKAPLSQTS LPSLCDDSES NAKDFASDSE PGRSETQSSA  180
EQFQALKKKL RLHHHQNDHN VQLALNSEFC YIPHEDDHIS FP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr040816.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008370148.17e-87myb family transcription factor PHL7-like
TrEMBLA0A498IIE21e-100A0A498IIE2_MALDO; Uncharacterized protein
STRINGXP_008370148.13e-86(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF106592535
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.11e-14G2-like family protein