PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr042848.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bZIP
Protein Properties Length: 260aa    MW: 27280.1 Da    PI: 6.2374
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr042848.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.21.5e-07221242425
                  XCHHHCHHHHHHHHHHHHHHHH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKk 25 
                   ++++r++kNRe+A rsR+RK+
  Pbr042848.1 221 QQKQKRMIKNRESAARSRERKQ 242
                  689******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-5215242No hitNo description
SuperFamilySSF579599.84E-5223243No hitNo description
PROSITE patternPS000360225240IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MMATSSKMAV VSTANSDLPR RESSICSLST FLADDDDNRH HKHQSMSMDD ILRNIYSSTG  60
TGTGNEIHDN GHHQQLHHHA EARSVDEVWK EIVAGGVGVG VGEEEVGVAE GDGGDQVRGG  120
EGGDGGGGGM EEMTLEDYLT RAGAVREEDV SLNAGGVPIG YGQFQVQPPP PPPPPPPAAQ  180
GQLVYANGTT STSGGGGGGG GGGRAGKRRA VQEAPLDKAT QQKQKRMIKN RESAARSRER  240
KQVGFGLCST MFVWFLRKC*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr042848.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009341305.11e-176PREDICTED: G-box-binding factor 4-like
TrEMBLA0A498JA881e-113A0A498JA88_MALDO; Uncharacterized protein
STRINGXP_009341305.11e-175(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-10bZIP family protein