PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Peaxi162Scf00003g02711.1
Organism
Petunia axillaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Petunioideae; Petunia
Family bHLH
Protein Properties Length: 326aa    MW: 36982.3 Da    PI: 4.7222
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Peaxi162Scf00003g02711.1genomeSGNView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.83e-112512911055
                               HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                       HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                               r+RR+riN+++  L++l+P+      +K++ +++Le+AveY+k Lq
  Peaxi162Scf00003g02711.1 251 RKRRERINERLRILQSLVPNG-----TKVDISTMLEEAVEYVKFLQ 291
                               9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.57E-14241306IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.504241290IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.8E-12246300IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003538.7E-12247296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.81E-11250295No hitNo description
PfamPF000101.6E-8251291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009555Biological Processpollen development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MEPVAAMSRG EWSSFSGMYS TDEEADFMTQ LLHNSSLSNE LPITISSSNF ESTMNTNNSM  60
YFSSQESSYN DCRSFPFSHP SHESYYPSHF PSILMSNDSS ITMEYSNMVE GEIISSPSNM  120
VLTNNLIEVD DFFNQDVSND SIESGENMPK DVLQLERDEK FSQDKVYSPP EISKKRSRLP  180
GDVAKNRRSV KLKKNIESTN EMDGEKKTVL QRKNSMISCC SEDESNVSHE LNGKTRASRG  240
SATDPQSLYA RKRRERINER LRILQSLVPN GTKVDISTML EEAVEYVKFL QLQIKLLSSD  300
DLWMYSPIAY NGMDIGLDMK LGMPKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754492e-38HG975449.1 Solanum pennellii chromosome ch10, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019255469.11e-142PREDICTED: transcription factor bHLH139-like
TrEMBLA0A1J6HWE31e-141A0A1J6HWE3_NICAT; Transcription factor bhlh84
STRINGXP_009611804.11e-136(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA63922101
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.19e-54bHLH family protein